Insertion junction: CLIP2.013049_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013049
Chromosome:chromosome 7
Location:1856335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325738 (1 of 19) PTHR31251//PTHR31251:SF1 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGATACAGCCACCGGCGCCTCCAGCTCCAGCCCGCATGTTGCTCGCTC
Internal bar code:ACATGGATCAAGTGATGCACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3658
LEAP-Seq percent confirming:99.3865
LEAP-Seq n confirming:162
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:163

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGATGGCTGCTTACTCA
Suggested primer 2:AGCTTCTCACGGTCTCTTGC