Insertion junction: CLIP2.013052_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013052
Chromosome:chromosome 3
Location:257390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144344 (1 of 1) IPR003613//IPR011009//IPR013083//IPR013320 - U box domain // Protein kinase-like domain // Zinc finger, RING/FYVE/PHD-type // Concanavalin A-like lectin/glucanase domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGCACCGGCTCAAAGGGCTGCGGCACGAAGCTGTAGCAGGGGTCGC
Internal bar code:AGGGGAATTTGATCTCCAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2796
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCATCCATCTAGTCGC
Suggested primer 2:GAGTTGAACCTGTTGCAGCG