Insertion junction: CLIP2.013057_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013057
Chromosome:chromosome 17
Location:1768695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708850 (1 of 226) IPR012337 - Ribonuclease H-like domain CDS
Cre17.g708901 (1 of 20) PF01822 - WSC domain (WSC) 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGCAGGCGTGGCAGTGCTGCAGGATCGACATGTAGTCGGCTGAGTA
Internal bar code:GAGAGTCATTATGGAAAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1186
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATTTGCAAGGCCAGTTG
Suggested primer 2:CGGGTCTCGGTTGTTGTCAA