Insertion junction: CLIP2.013061_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013061
Chromosome:chromosome 7
Location:3306554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334650 (1 of 1) K10695 - E3 ubiquitin-protein ligase RNF1/2 [EC:6.3.2.19] (RNF1_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATGGTGCGTGCACGTCGCATGTGTGTTCTGTCACGACGCCTTCATC
Internal bar code:TTGGGTGGTCGGAGCACGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAATCCTCCCCATCCAGA
Suggested primer 2:TGCTCTGACTGCAGCTGAAG