Insertion junction: CLIP2.013061_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013061
Chromosome:chromosome 7
Location:3306561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334650 (1 of 1) K10695 - E3 ubiquitin-protein ligase RNF1/2 [EC:6.3.2.19] (RNF1_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTACGGCGTGCGCGGCGCGAGCTGTCCGTCCCGCACAGTACGTGCGTC
Internal bar code:TTGGGTGGTCGGAGCACGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4803
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCTGACTGCAGCTGAAG
Suggested primer 2:ACGAATCCTCCCCATCCAGA