Insertion junction: CLIP2.013062_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013062
Chromosome:chromosome 9
Location:5819617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411450 DAP1,DNAAF2,Ktu,MOT45,PF13,PRR1 (1 of 3) PF08190 - pre-RNA processing PIH1/Nop17 (PIH1); Dynein Assembly factor PIH domain 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTCGCTTTGCTGCATCGCATACACTGTCTTTGCGCTATTTTTCCTTG
Internal bar code:AGTGGGCTTCATTCACAGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:229
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTACGTGTGTGC
Suggested primer 2:GCTGCAGGAGATGACCAAGT