Insertion junction: CLIP2.013065_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013065
Chromosome:chromosome 2
Location:5034248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111000 RRA1,CGL9 (1 of 3) PTHR10994//PTHR10994:SF3 - RETICULON // ARABINOSYLTRANSFERASE; Reduced residual arabinose 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATCCATGGTGCCTGCGACGGCGTTGCCTGCGATAGCTGCTCCGACACT
Internal bar code:CATGATGTACCGGTGGGTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2148
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGAGAAGAGGCCGAAAG
Suggested primer 2:GGGGCGCTATCACTCAGTAC