Insertion junction: CLIP2.013066_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013066
Chromosome:chromosome 7
Location:2496655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329550 VFL5 Variable flagella protein 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACAGCGACCAGGCAGCTTCTGAGCAGGTCGTCGAGGAGGAGGTGGATT
Internal bar code:ACTTATTAGTACGGCTCGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3458
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGCCTGGTCAAGTAAGG
Suggested primer 2:CGGTGGAGGAGGTGGTAGTA