Insertion junction: CLIP2.013067_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013067
Chromosome:chromosome 16
Location:6228657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676537 intron
lncRNA_TCONS_00152018 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTACAGCAAGCAGAGGGTGCTGGTACGCAAAGCACGCAGCAGGCACC
Internal bar code:GAAGCGGTGGACTTGGTCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2674
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGCTTCTAGGGCTTCA
Suggested primer 2:GTCCGATGAATGAACGCACG