Insertion junction: CLIP2.013073_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013073
Chromosome:chromosome 6
Location:6440470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293650 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCAGGAGGGTAAGGCGAAAGTGGGTAAGACGAGAGAATACAGTTGGT
Internal bar code:AAATTTAGGATCAGCCAGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCAAGCAATCTCCTGCC
Suggested primer 2:TTGGGAGCGAGGTGTGTAAC