Insertion junction: CLIP2.013076_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013076
Chromosome:chromosome 3
Location:3861855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170400 (1 of 1) PF12579 - Protein of unknown function (DUF3755) (DUF3755) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAAAAAGGATTCAGGCACCAGTGATTTGATGTGGGAGGCTGCTGGCG
Internal bar code:GACACGAGAGCTTCAACGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2151
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTCCTAGTGGCCCAGCA
Suggested primer 2:GTCCCGATAGCGCATGAGAA