Insertion junction: CLIP2.013088_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013088
Chromosome:chromosome 17
Location:2065777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711250 MIP2 (1 of 2) PTHR19139:SF180 - AQUAPORIN-1; Aquaporin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCGCATGTGCACACGCATGGGGAGGGCCGGAGGAGGGACGGGGCGG
Internal bar code:CGCGCACGTAAGATAAACTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:958
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCCCTTGTTGCAGAGTG
Suggested primer 2:CCTGTCATACCCACACCCAC