Insertion junction: CLIP2.013096_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013096
Chromosome:chromosome 13
Location:35360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g561800 GEX1 (1 of 34) PF00168 - C2 domain (C2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGACCTGCCCGCCTGGCACGGAGCTGCTCGCAGGAGGGTCCGGCCCG
Internal bar code:GCGAATCTGGCACTCTGCCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:705
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTGACACAACTGCCTGA
Suggested primer 2:TGGTGTAAGATGGGTGCCAC