Insertion junction: CLIP2.013105_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013105
Chromosome:chromosome 6
Location:3280968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277250 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCCCAGGCGTCACGGGCCAGGCAAAGTTGCGCTTGGCAGCTTTGTAG
Internal bar code:AGGGCGATGACCAGTCTGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3247
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCCAGCTGCATGTCAGA
Suggested primer 2:GATCTGGGGAACACCTGGTG