Insertion junction: CLIP2.013109_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013109
Chromosome:chromosome 1
Location:2690786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016250 MLO3,MLO4 (1 of 5) PF03094 - Mlo family (Mlo); MLO family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAGAAAAAGCCCATTCCTCCCGCGAGACCCAAATGTGCAGCACGACG
Internal bar code:ACCTGATCATGTGCGATCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCTTATTGTCCGGGCC
Suggested primer 2:ACGGCTTACAGTGGGATTGG