Insertion junction: CLIP2.013115_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013115
Chromosome:chromosome 17
Location:82029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696450 (1 of 19) IPR000225//IPR016024 - Armadillo // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACACAATGCCCATAAGTCCGCGGTGCGTGCTGCCGCCCTCCCCGGC
Internal bar code:GTCAAACTGGGGAGGGCTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2987
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCGTCTCAGTCAACGTC
Suggested primer 2:CGTACCGCTGCATTGACATG