Insertion junction: CLIP2.013124_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013124
Chromosome:chromosome 3
Location:4649247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177007 (1 of 1) PTHR12480:SF6 - JMJC DOMAIN-CONTAINING PROTEIN 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATCGTCAAGCGAATAGCCCGTTCTTAACAGACGGGGGCTCCAATGCC
Internal bar code:GCTTATGTAGCTTGGTGTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1076
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCAACGCTCACACCTAT
Suggested primer 2:GTCGTCATAGCTCAGGTCGG