Insertion junction: CLIP2.013135_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013135
Chromosome:chromosome 1
Location:2407384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013800 SXD1,TCY1 (1 of 1) PF14392 - Zinc knuckle (zf-CCHC_4); Zinc finger containing protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCATGTCTGTCCTCTCCCACGCGACTTCCTGCCCTCACTCCTCCCCTC
Internal bar code:AGTGATAGTGCAGTAAAGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:61
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTAAAGGGAAGCGACGCT
Suggested primer 2:TCGCCACCAAGTCTGTACAC