Insertion junction: CLIP2.013137_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.013137
Chromosome:chromosome 9
Location:1540225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399250 KIR1 (1 of 7) PF12680 - SnoaL-like domain (SnoaL_2); Ketoacid isomerase-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCGTAAGTACCGTACGGTTTCTAACGTACGGGACGCCAAGCGACCG
Internal bar code:TGTTGTAAATTAGGGACACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGCACAAAAGTCCGCA
Suggested primer 2:TTGTGTCCAGTGGCGACTAC