Insertion junction: CLIP2.013148_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013148
Chromosome:chromosome 2
Location:837049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800173 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGAGCTTCGTCGGTGGCCAACGGCGACGACAACGCGCGAACGCACGCG
Internal bar code:AAGTATTATTTGGCAAGTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:599
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGACAGGCCTACTTGTT
Suggested primer 2:CAGAGGAGGAGGTGGAGGTG