Insertion junction: CLIP2.013150_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013150
Chromosome:chromosome 3
Location:5356864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183250 (1 of 1) IPR027437 - 30s ribosomal protein S13, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCAAACCCAGGCAGCAGGAAAAGCGAGGGACCCCGACGTCCTTGCTT
Internal bar code:GTGAGCCGGCCGGTCCTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4424
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACGCTTTAGCATGCTGC
Suggested primer 2:ATATGCGCATCTCGGCTTCA