Insertion junction: CLIP2.013155_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013155
Chromosome:chromosome 17
Location:4365899
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730483 (1 of 1) IPR000104//IPR016181 - Antifreeze protein, type I // Acyl-CoA N-acyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCAGCCTGGCCGCAGCTGCCCGAACCGCCGTGGTCGTTGCCCCCGCG
Internal bar code:AGGCTTAGATTTGACATGCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:704
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGACGTTCAAGTGGGTGC
Suggested primer 2:TTAGCATAGACCACGGCACC