Insertion junction: CLIP2.013175_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013175
Chromosome:chromosome 2
Location:4141988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800224 CDS
lncRNA_TCONS_00041505 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGTGGTCAGCCGAGCCGAACGAGTACACGACACAGGCGATACCGCTC
Internal bar code:GGGAGGGGAGTTGAATGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2930
LEAP-Seq percent confirming:84.0426
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGGGGCTATGGGTTGTG
Suggested primer 2:ACCCTGGGGCATCTAGATGT