Insertion junction: CLIP2.013184_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013184
Chromosome:chromosome 1
Location:823836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004600 RWP12 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGACCAATACCGGGGTGGCTTCCGCCCCGTTCCCCAAAGCGCAAGCCT
Internal bar code:GTTGTCATTCTGATAACGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4775
LEAP-Seq percent confirming:98.7342
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGTTTTGGAACGTGGTG
Suggested primer 2:CGGGGGAATTGGGATGTGAA