Insertion junction: CLIP2.013184_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013184
Chromosome:chromosome 1
Location:823837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g004600 RWP12 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTTGTCGGTGCGATTGCGTAAGCCTTGATACCGTCTATTGACTGCAA
Internal bar code:GGTTGCAAACACGAGTCTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1617
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGGAATTGGGATGTGAA
Suggested primer 2:GTCGGTTTTGGAACGTGGTG