Insertion junction: CLIP2.013187_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013187
Chromosome:chromosome 13
Location:4011068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590500 FAD6,DES6 (1 of 1) K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA); Omega-6-fatty acid desaturase, chloroplast isoform intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGACCGTGTGACGGCTCCGCGGCTGTGAAGAATTTCATCCGCATTG
Internal bar code:GTCTGTCGAAGTGCATTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2966
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCACGAGTTTCAAGTT
Suggested primer 2:TCCCTACCGTCTGCAGTACA