Insertion junction: CLIP2.013193_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013193
Chromosome:chromosome 3
Location:1967009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155501 (1 of 1) PTHR30269 - TRANSMEMBRANE PROTEIN YFCA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTACCTGATGAAGACCTACGCAGGCACGGGCCCGGACGGCACCAGCGC
Internal bar code:GCCGACGCTAGAGGTCTAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGATACAGAACACCCAC
Suggested primer 2:GTGAGTGTCCACTACCGCAA