Insertion junction: CLIP2.013194_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013194
Chromosome:chromosome 6
Location:73066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249350 DMC3,DMT1A (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Putative DNA methylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCGTCCGTGGCCGAGCGGGATGAGCCGGTGGTGGTGGTGGTGATGG
Internal bar code:GTTGATCTTTGTCCTGGATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2483
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCAAGTACTGCGTGGTG
Suggested primer 2:CAAGCACGCAAAGCAAGACT