Insertion junction: CLIP2.013195_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013195
Chromosome:chromosome 3
Location:1819728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154250 MAPKKK6 (1 of 1) IPR000719//IPR001245//IPR002290//IPR011009//IPR013320//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Concanavalin A-like lectin/glucanase domain // Tyrosine-protein kinase, catalytic domain; Mitogen-Activated Protein Kinase Kinase Kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATCAGCGTGCTACGGAGGGTGCAGGACACCAAGCCGCAGTATGCCAC
Internal bar code:ATAAATGGGAAACGGCGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1998
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGCACCACATATGAAAG
Suggested primer 2:TGCTGCTCACTAACCCCATG