Insertion junction: CLIP2.013203_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013203
Chromosome:chromosome 6
Location:3846712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278180 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGTGGGCAGGGTCGGAAAGTTTCGTGGGCGACACGCGACACACTGGC
Internal bar code:CTTGTGCTTGATGAAGTCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:464
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCGTTTGCGTTTGCTGCT
Suggested primer 2:CTTGCAGTTATCACGAGCGC