Insertion junction: CLIP2.013212_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013212
Chromosome:chromosome 1
Location:4404675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030000 (1 of 1) PTHR12242:SF1 - PROTEIN ROLLING STONE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACAAAGCAGCCCAAGCCCGCCCGCTGCACCCAATCTGCTGTTGCGGCC
Internal bar code:TAGCGGTCAGGTGTACGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1352
LEAP-Seq percent confirming:39.1304
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGACCCACTTCTCGACTA
Suggested primer 2:CCTTTGAGGCAAGGGAGGAG