Insertion junction: CLIP2.013214_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013214
Chromosome:chromosome 1
Location:582162
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003500 CLUB1,MSH2 (1 of 1) IPR017987 - Wilm's tumour protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGACGCTCCGCCAGCAGTCGCGGCCCCAGGAGTTGCTGCCCCCAGC
Internal bar code:TTTAATACAGGGCACATCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:762
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCTTGTGTACCCTCCAC
Suggested primer 2:GGTAAGGGAGCACACGTGAA