Insertion junction: CLIP2.013219_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013219
Chromosome:chromosome 17
Location:2062455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711200 PGM16 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; (1 of 1) PTHR18901//PTHR18901:SF2 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // GLYCEROL-1-PHOSPHATE PHOSPHOHYDROLASE 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGAATGATCGTGTCCCCGCTCCCATTCCGCCACCATCTCTGGGCGGG
Internal bar code:GAAAAGCTTACTAAATACTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:462
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTCAGATTGTGAGCAGG
Suggested primer 2:GCGAGTCCTCAAACACCAGA