Insertion junction: CLIP2.013222_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013222
Chromosome:chromosome 12
Location:2536286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507000 FFT6 putative fructan fructosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCACCCACCTGCGCCTCCAGCGCCGGCCCCAGTTGTGACAGGCGGCGC
Internal bar code:AAAAACACAGCGTAACCCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGGCCTCATATTACGGT
Suggested primer 2:CATCCTTTATGCTGCCGTGC