Insertion junction: CLIP2.013244_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013244
Chromosome:chromosome 7
Location:361091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314650 RECA1,RECA,EZY19 Chloroplast RecA recombination protein; (1 of 1) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTACACACCTCATTTTTGGAGGTCCGCTGCGCCACTCCACTGCCCGCAA
Internal bar code:TTAGAGATTTGGGGGCCAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:128
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTTTTGTAGCTGTTGCC
Suggested primer 2:CCCCTTGGGCTTGATTGAGT