Insertion junction: CLIP2.013244_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013244
Chromosome:chromosome 7
Location:361095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314650 RECA1,RECA,EZY19 Chloroplast RecA recombination protein; (1 of 1) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATACCAGCCCAAACTGAACCGAACCGAAGGGGGAGTAGGTACGCCGG
Internal bar code:TTAGAGATTTGGGGGCCAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTTGGGCTTGATTGAGT
Suggested primer 2:CCGGTTTTGTAGCTGTTGCC