Insertion junction: CLIP2.013272_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013272
Chromosome:chromosome 16
Location:1517821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653150 CPR3 (1 of 2) PF01841 - Transglutaminase-like superfamily (Transglut_core); Cysteine protease, transglutaminase-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCCAAAAACCTGGACGTCGATACACGCGCAGGTTTGCTGCTGAATGG
Internal bar code:ATTAAGAGTGCCTCGTTATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3474
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACTACGTTAAGGCCGCG
Suggested primer 2:AGCAGGAAGTTGTGGGGATG