Insertion junction: CLIP2.013279_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013279
Chromosome:chromosome 16
Location:6195969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676800 (1 of 1) PTHR11017//PTHR11017:SF145//PTHR11017:SF158//PTHR12203//PTHR12203:SF13 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED // KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // F10K1.7 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACCTCTGCCCGCTGCCTCACCCGCCACTGCCCGCTGCCCCCGCAGGG
Internal bar code:CGAAATCTCGGCGGGTCGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATCTCGGTGACCAGGAT
Suggested primer 2:GGGCAACACGATACACAGGA