Insertion junction: CLIP2.013284_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013284
Chromosome:chromosome 12
Location:2189701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509200 (1 of 1) PF00722//PF03935 - Glycosyl hydrolases family 16 (Glyco_hydro_16) // Beta-glucan synthesis-associated protein (SKN1) (SKN1); weakly Similar to Beta-Glucan Synthesis-Associated intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCGTAACGCAGGGGCACGGCGGGGACGTTGGCACGTTGCATTGGCGT
Internal bar code:TGGGATTCTCGAAGTTTCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACACCAGGCATGACAG
Suggested primer 2:TTACGGTCCAACGTTGCGTA