Insertion junction: CLIP2.013287_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.013287
Chromosome:chromosome 7
Location:3942330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339554 (1 of 1) K03372 - MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1 (ACATN, SLC33A1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTAGCTAAGGAAAGGAGACGGGGGTCGGCACACGTGTGCGCGCGGCGG
Internal bar code:TTCATCTGAGCTCGTGCTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1543
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACCCCAACACCACCATC
Suggested primer 2:CGTGCGTGTGTGTATTGCAA