Insertion junction: CLIP2.013289_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013289
Chromosome:chromosome 14
Location:3186058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628752 (1 of 3) PTHR10165//PTHR10165:SF35 - LIPID PHOSPHATE PHOSPHATASE // DIACYLGLYCEROL PYROPHOSPHATE PHOSPHATASE 1-RELATED 5'UTR
Cre14.g801650 (1 of 9) IPR009069 - Cysteine alpha-hairpin motif superfamily CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCTCCGGCACCGTGCCAGTCGATGCCTCCGCCTCGCCTGGCGCGCTC
Internal bar code:TTATAAATAGGGCCTTTATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1021
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGTCCCCACTACCCCCAC
Suggested primer 2:GGTTCAAGGGGCAGAGTACC