Insertion junction: CLIP2.013301_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013301
Chromosome:chromosome 9
Location:2235981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801012 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGCGGCTTGCAGGGCATGCGACAAGGAGGGGCGTGGGCGGCGCTGC
Internal bar code:CGCCCACTTATGCAGTCAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3175
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCACTGACAGCAGCGAAA
Suggested primer 2:TCTGCAGCTGGATCAAGTGG