Insertion junction: CLIP2.013309_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013309
Chromosome:chromosome 3
Location:251654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144324 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGTGGGGTGTGGCCCGGTGAGGTGAGGGGCCGCCTGCGCTGGCTTG
Internal bar code:GTATCTTTCTGTTGATATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2590
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACTGAACACTGCAGCCC
Suggested primer 2:CCTTCGACCAGGTCCTCAAC