Insertion junction: CLIP2.013309_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.013309
Chromosome:chromosome 3
Location:251654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144324 (1 of 8) PF00560 - Leucine Rich Repeat (LRR_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCTTGGCCTCACCTGGACGCGTACGCCGCGTTGCGCGCCTGCCGCTG
Internal bar code:GTATCTTTCTGTTGATATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:515
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCGACCAGGTCCTCAAC
Suggested primer 2:AGTACTGAACACTGCAGCCC