Insertion junction: CLIP2.013316_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013316
Chromosome:chromosome 1
Location:1976747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010880 (1 of 2) K18598 - echinoderm microtubule-associated protein-like 6 (EML6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAACACAAGCACACACACACGCTCGATCCCTGGCGACCGTGCCCCTGGA
Internal bar code:CACTCACTGTAGAGCTATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:247
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGAAGGACGACAAGGG
Suggested primer 2:CCACCCTTTCGTGTTCCGTA