Insertion junction: CLIP2.013321_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.013321
Chromosome:chromosome 9
Location:2691331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGGCAGCGAGCACGTCTACAGTACTGTACTTTGTACGGGCAAGGGCA
Internal bar code:ATATGATGGCGCGGCAGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5826
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACCTGACGTGTTCGCGA
Suggested primer 2:GCCTCCACAGACACACGTAA