Insertion junction: CLIP2.013333_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.013333
Chromosome:chromosome 2
Location:1533795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084400 P4H9,PFH9,PHX4 (1 of 8) PTHR10869//PTHR10869:SF71 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED; Prolyl 4-hydroxylase 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCACACACACACACACACACCAACAACAACATACCGCCAACCCCTC
Internal bar code:TAGGCCCGAGGAGGCGACCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4380
LEAP-Seq percent confirming:72.3077
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTGGATTTGTCGCCAGA
Suggested primer 2:TCGTCTTTCGTCAGCGTCAA