Insertion junction: CLIP2.013336_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.013336
Chromosome:chromosome 10
Location:4376953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g450050 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGTTGCTGTACACACCAAACCTTCCGCTCTCACCACAACCGGCGCCA
Internal bar code:CGAGGGGCCAGTCCCCGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2564
LEAP-Seq percent confirming:97.8022
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGTACCCGAGGCTCACT
Suggested primer 2:TCATGGGAGCTCAGCAACAG