Insertion junction: CLIP2.013336_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.013336
Chromosome:chromosome 11
Location:923432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467656 (1 of 9) IPR007112//IPR009009 - Expansin/pollen allergen, DPBB domain // RlpA-like double-psi beta-barrel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAGCATGCGTCAGGGGCATG
Internal bar code:ATGGTGCGGCAGCTTATCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:70.4545
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTCAGTTTGCGGGTTTG
Suggested primer 2:CCATCCCTACCCACAAACCC