Insertion junction: CLIP2.013340_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.013340
Chromosome:chromosome 13
Location:3874211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589600 (1 of 100) IPR001810 - F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCTCCTTAGACCATCGCAATGACATGCATGGGGGAAGGGGCAGACCG
Internal bar code:TACTGGGGTTCCCTCATCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTCATCATCGGACACG
Suggested primer 2:TTATCCGTCGGGGGTGTTTG